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This function is used in the CompareSim function. It adds two columns to the dataset if the option Results_Simulations is set to TRUE : TestData is a boolean to know if the tree was in the test dataset, and ValidAsso is a boolean to know if the associated species is the right one.

Usage

ValidTaxo(list_res, test_taxo)

Arguments

list_res

Results of SimFullCom function applied to the test dataset: a list of data.tables with simulated taxonomic information.

test_taxo

The original taxonomic information for the test dataset.

Value

This function returns a data.table similar to Data inputted in argument, with two additional columns (TestData and ValidAsso).

Details

This function compares the taxonomic information in the column GenSpCor of the simulated dataset list_res with the original information from the columns Genus and Species of the dataset test_taxo. It then adds two columns to the dataset, specifying if each tree is used in the test and if the estimated species is the same as the original one.